Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 GAPDHP40-201ENST00000505218 1006 ntBASIC13.63□□□□□ -0.23
SLC25A1P53007 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC140878.1-201ENST00000565277 250 ntBASIC13.63□□□□□ -0.23
SLC25A1P53007 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC023511.2-201ENST00000618803 211 ntBASIC13.63□□□□□ -0.23
SLC25A1P53007 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC25A1P53007 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC25A1P53007 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 AL139400.1-201ENST00000366220 510 ntBASIC13.62□□□□□ -0.23
SLC25A1P53007 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 AC114501.2-201ENST00000439631 535 ntBASIC13.62□□□□□ -0.23
SLC25A1P53007 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.62□□□□□ -0.23
SLC25A1P53007 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC25A1P53007 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 AC027369.6-201ENST00000525520 931 ntBASIC13.62□□□□□ -0.23
SLC25A1P53007 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.62□□□□□ -0.23
SLC25A1P53007 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 AC025678.2-201ENST00000562061 970 ntBASIC13.62□□□□□ -0.23
SLC25A1P53007 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SLC25A1P53007 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SLC25A1P53007 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC25A1P53007 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC25A1P53007 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC25A1P53007 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms