Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
GTF2A1P52655 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.1■□□□□ 0.01
GTF2A1P52655 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 STK19B-204ENST00000512515 211 ntBASIC15.1■□□□□ 0.01
GTF2A1P52655 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.1■□□□□ 0.01
GTF2A1P52655 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.1■□□□□ 0.01
GTF2A1P52655 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GTF2A1P52655 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GTF2A1P52655 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.1■□□□□ 0.01
GTF2A1P52655 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.1■□□□□ 0.01
GTF2A1P52655 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.09■□□□□ 0.01
GTF2A1P52655 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 AC015802.1-201ENST00000588104 1449 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 AL353593.2-201ENST00000602529 1483 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC15.09■□□□□ 0.01
GTF2A1P52655 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GTF2A1P52655 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 AC087499.1-201ENST00000418141 1075 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 AC117947.1-201ENST00000427448 529 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 AC112907.2-201ENST00000448639 330 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.09■□□□□ 0.01
GTF2A1P52655 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.09■□□□□ 0.01
GTF2A1P52655 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 AC005336.2-201ENST00000593183 939 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 AL138831.2-201ENST00000606564 490 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 HYMAI.1-201ENST00000620949 238 ntBASIC15.09■□□□□ 0.01
GTF2A1P52655 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
GTF2A1P52655 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GTF2A1P52655 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GTF2A1P52655 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GTF2A1P52655 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GTF2A1P52655 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GTF2A1P52655 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms