Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 HNRNPABP1-201ENST00000406003 734 ntBASIC13.82□□□□□ -0.2
ATRXP46100 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 LINC00634-202ENST00000505157 222 ntBASIC13.82□□□□□ -0.2
ATRXP46100 OR3A1-202ENST00000615105 966 ntBASIC13.82□□□□□ -0.2
ATRXP46100 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATRXP46100 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ATRXP46100 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.82□□□□□ -0.2
ATRXP46100 NAT9-219ENST00000582524 573 ntTSL 4 BASIC13.82□□□□□ -0.2
ATRXP46100 AC012073.1-201ENST00000606114 1108 ntBASIC13.82□□□□□ -0.2
ATRXP46100 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.82□□□□□ -0.2
ATRXP46100 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.82□□□□□ -0.2
ATRXP46100 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATRXP46100 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATRXP46100 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 AL512306.1-201ENST00000432698 848 ntBASIC13.81□□□□□ -0.2
ATRXP46100 AC004837.1-201ENST00000446267 564 ntBASIC13.81□□□□□ -0.2
ATRXP46100 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.81□□□□□ -0.2
ATRXP46100 TMA16-204ENST00000508268 608 ntTSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 AC009779.1-201ENST00000551138 283 ntBASIC13.81□□□□□ -0.2
ATRXP46100 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ATRXP46100 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 HIST2H2BA-201ENST00000412169 381 ntBASIC13.81□□□□□ -0.2
ATRXP46100 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 EIF3FP3-201ENST00000434851 1086 ntBASIC13.81□□□□□ -0.2
ATRXP46100 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
ATRXP46100 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC13.81□□□□□ -0.2
ATRXP46100 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.81□□□□□ -0.2
ATRXP46100 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATRXP46100 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 AC136759.1-202ENST00000530858 2194 ntBASIC13.8□□□□□ -0.2
ATRXP46100 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.8□□□□□ -0.2
ATRXP46100 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATRXP46100 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATRXP46100 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.8□□□□□ -0.2
ATRXP46100 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.8□□□□□ -0.2
ATRXP46100 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.8□□□□□ -0.2
ATRXP46100 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.8□□□□□ -0.2
ATRXP46100 RN7SL470P-201ENST00000583069 259 ntBASIC13.8□□□□□ -0.2
ATRXP46100 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATRXP46100 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms