Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.87□□□□□ -0.19
APOBEC1P41238 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 MYO15B-237ENST00000642007 4893 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.87□□□□□ -0.19
APOBEC1P41238 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
APOBEC1P41238 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 CRB3P1-201ENST00000449338 276 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.87□□□□□ -0.19
APOBEC1P41238 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.87□□□□□ -0.19
APOBEC1P41238 SPDYE22P-201ENST00000582158 798 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.87□□□□□ -0.19
APOBEC1P41238 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.87□□□□□ -0.19
APOBEC1P41238 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.87□□□□□ -0.19
APOBEC1P41238 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 AL360270.3-201ENST00000609118 1348 ntBASIC13.87□□□□□ -0.19
APOBEC1P41238 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.87□□□□□ -0.19
APOBEC1P41238 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 AL158070.2-201ENST00000623713 1621 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 REXO1L2P-201ENST00000425429 2069 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
APOBEC1P41238 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 AL162726.2-201ENST00000438986 1017 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.86□□□□□ -0.19
APOBEC1P41238 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.86□□□□□ -0.19
APOBEC1P41238 AC138761.1-201ENST00000584393 385 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 CTBP2P3-201ENST00000585629 1255 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.86□□□□□ -0.19
APOBEC1P41238 LINC02228-204ENST00000642115 2962 ntBASIC13.86□□□□□ -0.19
APOBEC1P41238 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOBEC1P41238 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOBEC1P41238 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.86□□□□□ -0.19
APOBEC1P41238 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms