Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.81■□□□□ 0.28
USP8P40818 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.81■□□□□ 0.28
USP8P40818 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 AC092580.3-201ENST00000430932 139 ntBASIC16.81■□□□□ 0.28
USP8P40818 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.81■□□□□ 0.28
USP8P40818 SLED1-202ENST00000512051 380 ntBASIC16.81■□□□□ 0.28
USP8P40818 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 AC010336.2-201ENST00000564226 506 ntBASIC16.81■□□□□ 0.28
USP8P40818 AC015911.4-201ENST00000588022 1070 ntBASIC16.81■□□□□ 0.28
USP8P40818 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.81■□□□□ 0.28
USP8P40818 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 AC006538.3-201ENST00000612495 578 ntBASIC16.81■□□□□ 0.28
USP8P40818 AC106028.4-201ENST00000614509 607 ntBASIC16.81■□□□□ 0.28
USP8P40818 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.81■□□□□ 0.28
USP8P40818 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
USP8P40818 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP8P40818 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.8■□□□□ 0.28
USP8P40818 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.8■□□□□ 0.28
USP8P40818 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.8■□□□□ 0.28
USP8P40818 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.8■□□□□ 0.28
USP8P40818 LINC01115-203ENST00000606068 577 ntBASIC16.8■□□□□ 0.28
USP8P40818 GPALPP1-207ENST00000611650 899 ntBASIC16.8■□□□□ 0.28
USP8P40818 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.8■□□□□ 0.28
USP8P40818 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
USP8P40818 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP8P40818 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.8■□□□□ 0.28
USP8P40818 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 AC100757.3-201ENST00000622361 1406 ntBASIC16.79■□□□□ 0.28
USP8P40818 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 AC023024.2-201ENST00000623561 1993 ntBASIC16.79■□□□□ 0.28
USP8P40818 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms