Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC007389.4-201ENST00000454674 793 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 INE1-201ENST00000456273 945 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 KRT18P25-201ENST00000508931 1278 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGCLP35914 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HMGCLP35914 PTP4A1P2-201ENST00000546033 454 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.24■□□□□ 0.03
HMGCLP35914 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 AL603764.1-201ENST00000636452 321 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGCLP35914 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 LILRP1-201ENST00000444199 1370 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGCLP35914 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
HMGCLP35914 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGCLP35914 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGCLP35914 AL512384.1-201ENST00000406683 331 ntBASIC15.23■□□□□ 0.03
HMGCLP35914 BAATP1-201ENST00000412284 1225 ntBASIC15.23■□□□□ 0.03
HMGCLP35914 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGCLP35914 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 CR383656.12-201ENST00000549567 513 ntBASIC15.23■□□□□ 0.03
HMGCLP35914 AC005225.4-201ENST00000557330 545 ntBASIC15.23■□□□□ 0.03
HMGCLP35914 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGCLP35914 MIR5189-201ENST00000577370 114 ntBASIC15.23■□□□□ 0.03
HMGCLP35914 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGCLP35914 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGCLP35914 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCLP35914 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGCLP35914 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGCLP35914 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HMGCLP35914 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCLP35914 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 LINC00528-201ENST00000600723 2160 ntBASIC15.22■□□□□ 0.03
HMGCLP35914 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCLP35914 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
HMGCLP35914 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCLP35914 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 AC012441.1-201ENST00000446669 685 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms