Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CTNNA1P35221 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 AC005702.4-201ENST00000618393 416 ntBASIC16.27■□□□□ 0.2
CTNNA1P35221 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.27■□□□□ 0.2
CTNNA1P35221 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTNNA1P35221 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNNA1P35221 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNNA1P35221 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.27■□□□□ 0.19
CTNNA1P35221 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.27■□□□□ 0.19
CTNNA1P35221 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNNA1P35221 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.27■□□□□ 0.19
CTNNA1P35221 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CTNNA1P35221 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CTNNA1P35221 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNNA1P35221 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 CETN4P-206ENST00000642099 2168 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CTNNA1P35221 SPDYE7P-202ENST00000420373 878 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 AC112482.1-201ENST00000492080 688 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.26■□□□□ 0.19
CTNNA1P35221 AL589739.1-201ENST00000607720 493 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CTNNA1P35221 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 CICP14-201ENST00000629111 2732 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 AC041040.2-201ENST00000622926 2899 ntBASIC16.26■□□□□ 0.19
CTNNA1P35221 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTNNA1P35221 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.26■□□□□ 0.19
CTNNA1P35221 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.26■□□□□ 0.19
CTNNA1P35221 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNNA1P35221 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTNNA1P35221 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
CTNNA1P35221 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.25■□□□□ 0.19
CTNNA1P35221 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 RPSAP43-201ENST00000402237 625 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.25■□□□□ 0.19
CTNNA1P35221 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CTNNA1P35221 SERBP1P3-201ENST00000459980 809 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.25■□□□□ 0.19
CTNNA1P35221 MIR3687-2-201ENST00000577708 61 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.25■□□□□ 0.19
CTNNA1P35221 AC010327.4-202ENST00000591484 748 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 MIR3687-1-201ENST00000614492 61 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 LINC00628-201ENST00000628516 1289 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 AL033527.5-202ENST00000641632 1098 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 AL645728.2-202ENST00000641679 227 ntBASIC16.25■□□□□ 0.19
CTNNA1P35221 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTNNA1P35221 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.25■□□□□ 0.19
CTNNA1P35221 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTNNA1P35221 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTNNA1P35221 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 541.2 ms