Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TNFSF4P23510 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 CU639417.3-201ENST00000624240 1404 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC090616.6-203ENST00000579186 1945 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 DGCR5-201ENST00000399539 862 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC004066.1-201ENST00000502488 802 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.16□□□□□ -0.3
TNFSF4P23510 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
TNFSF4P23510 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.16□□□□□ -0.3
TNFSF4P23510 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 AL033527.5-201ENST00000641382 801 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 AL645728.2-202ENST00000641679 227 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 AC105233.6-201ENST00000642093 218 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TNFSF4P23510 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 PAUPAR-201ENST00000630360 2965 ntBASIC13.16□□□□□ -0.3
TNFSF4P23510 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFSF4P23510 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFSF4P23510 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms