Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
NR4A1P22736 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.37□□□□□ -0.11
NR4A1P22736 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.37□□□□□ -0.11
NR4A1P22736 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR4A1P22736 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
NR4A1P22736 RARRES2P8-201ENST00000566335 367 ntBASIC14.37□□□□□ -0.11
NR4A1P22736 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.37□□□□□ -0.11
NR4A1P22736 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
NR4A1P22736 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NR4A1P22736 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR4A1P22736 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.37□□□□□ -0.11
NR4A1P22736 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A1P22736 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A1P22736 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 WASH6P-202ENST00000359512 1437 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 TFAMP1-201ENST00000412727 736 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 ADH5P3-201ENST00000433842 1137 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.36□□□□□ -0.11
NR4A1P22736 DNAJB3-202ENST00000449667 1266 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 RN7SL589P-201ENST00000481268 310 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 SNHG9-202ENST00000564014 471 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.36□□□□□ -0.11
NR4A1P22736 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 AP001160.2-201ENST00000596071 487 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 AC026120.1-201ENST00000611536 926 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NR4A1P22736 AC105339.1-204ENST00000636249 355 ntBASIC14.36□□□□□ -0.11
NR4A1P22736 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.36□□□□□ -0.11
NR4A1P22736 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.36□□□□□ -0.11
NR4A1P22736 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR4A1P22736 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms