Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AL356737.1-201ENST00000634391 234 ntBASIC14.35□□□□□ -0.11
CCL4P13236 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.35□□□□□ -0.11
CCL4P13236 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL4P13236 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL4P13236 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL4P13236 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCL4P13236 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL4P13236 AL118508.1-201ENST00000613502 2345 ntBASIC14.35□□□□□ -0.11
CCL4P13236 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 AL137783.1-201ENST00000623494 1896 ntBASIC14.34□□□□□ -0.11
CCL4P13236 INE2-201ENST00000630399 1874 ntBASIC14.34□□□□□ -0.11
CCL4P13236 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.34□□□□□ -0.11
CCL4P13236 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 DPM3-202ENST00000368399 517 ntBASIC14.34□□□□□ -0.11
CCL4P13236 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL4P13236 GHSR-202ENST00000427970 912 ntBASIC14.34□□□□□ -0.11
CCL4P13236 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 RN7SL769P-201ENST00000469386 295 ntBASIC14.34□□□□□ -0.11
CCL4P13236 RN7SL11P-201ENST00000471305 293 ntBASIC14.34□□□□□ -0.11
CCL4P13236 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL4P13236 AC245884.6-201ENST00000515672 1067 ntBASIC14.34□□□□□ -0.11
CCL4P13236 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL4P13236 RN7SL774P-201ENST00000577467 290 ntBASIC14.34□□□□□ -0.11
CCL4P13236 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.34□□□□□ -0.11
CCL4P13236 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCL4P13236 CU633904.3-201ENST00000624042 1029 ntBASIC14.34□□□□□ -0.11
CCL4P13236 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL4P13236 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL4P13236 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL4P13236 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
CCL4P13236 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL4P13236 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCL4P13236 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL4P13236 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCL4P13236 AP005117.1-202ENST00000581724 1908 ntBASIC14.33□□□□□ -0.11
CCL4P13236 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms