Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.03■□□□□ -0
PCNAP12004 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 AC015922.1-201ENST00000421102 1152 ntBASIC15.03■□□□□ -0
PCNAP12004 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 AC241585.1-201ENST00000433527 519 ntBASIC15.03■□□□□ -0
PCNAP12004 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.03■□□□□ -0
PCNAP12004 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.03■□□□□ -0
PCNAP12004 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.03■□□□□ -0
PCNAP12004 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.03■□□□□ -0
PCNAP12004 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.03■□□□□ -0
PCNAP12004 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.03■□□□□ -0
PCNAP12004 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.03■□□□□ -0
PCNAP12004 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PCNAP12004 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.02■□□□□ -0
PCNAP12004 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCNAP12004 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.02■□□□□ -0
PCNAP12004 AL359258.3-201ENST00000622910 2331 ntBASIC15.02■□□□□ -0
PCNAP12004 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCNAP12004 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.02■□□□□ -0
PCNAP12004 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.02■□□□□ -0
PCNAP12004 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.02■□□□□ -0
PCNAP12004 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.02■□□□□ -0
PCNAP12004 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.02■□□□□ -0
PCNAP12004 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.02■□□□□ -0
PCNAP12004 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.02■□□□□ -0
PCNAP12004 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.02■□□□□ -0
PCNAP12004 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
PCNAP12004 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.02■□□□□ -0
PCNAP12004 AL844908.2-201ENST00000609461 460 ntBASIC15.02■□□□□ -0
PCNAP12004 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.02■□□□□ -0
PCNAP12004 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.02□□□□□ -0.01
PCNAP12004 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.02□□□□□ -0.01
PCNAP12004 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 LINC00552-201ENST00000625151 2579 ntBASIC15.02□□□□□ -0.01
PCNAP12004 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCNAP12004 AC126365.1-201ENST00000578585 1514 ntBASIC15.02□□□□□ -0.01
PCNAP12004 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCNAP12004 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PCNAP12004 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.01□□□□□ -0.01
PCNAP12004 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.01□□□□□ -0.01
PCNAP12004 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.01□□□□□ -0.01
PCNAP12004 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 AGAP7P-201ENST00000582299 2062 ntBASIC15.01□□□□□ -0.01
PCNAP12004 AGAP14-201ENST00000624701 2060 ntBASIC15.01□□□□□ -0.01
PCNAP12004 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.01□□□□□ -0.01
PCNAP12004 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCNAP12004 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCNAP12004 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms