Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
UBL4AP11441 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 FAM8A3P-201ENST00000427218 844 ntBASIC14.28□□□□□ -0.12
UBL4AP11441 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.28□□□□□ -0.12
UBL4AP11441 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.28□□□□□ -0.12
UBL4AP11441 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
UBL4AP11441 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBL4AP11441 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.28□□□□□ -0.12
UBL4AP11441 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.28□□□□□ -0.12
UBL4AP11441 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.28□□□□□ -0.12
UBL4AP11441 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
UBL4AP11441 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBL4AP11441 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBL4AP11441 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBL4AP11441 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
UBL4AP11441 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.27□□□□□ -0.12
UBL4AP11441 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
UBL4AP11441 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UBL4AP11441 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.27□□□□□ -0.12
UBL4AP11441 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBL4AP11441 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 RNA5SP421-201ENST00000516864 134 ntBASIC14.27□□□□□ -0.13
UBL4AP11441 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.27□□□□□ -0.13
UBL4AP11441 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 AC004840.1-201ENST00000636359 365 ntBASIC14.27□□□□□ -0.13
UBL4AP11441 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBL4AP11441 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBL4AP11441 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.27□□□□□ -0.13
UBL4AP11441 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms