Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 AL645728.2-202ENST00000641679 227 ntBASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40ALP0C0E4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AHCYP2-201ENST00000430630 1300 ntBASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AC112504.1-201ENST00000623415 1841 ntBASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 RN7SL560P-201ENST00000577943 264 ntBASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 AC138951.2-201ENST00000623455 1161 ntBASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40ALP0C0E4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40ALP0C0E4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RAB40ALP0C0E4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB40ALP0C0E4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC078819.1-201ENST00000547454 765 ntBASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC012085.1-201ENST00000548270 765 ntBASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RN7SL48P-201ENST00000579283 293 ntBASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms