Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CYP3A4P08684 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CYP3A4P08684 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CYP3A4P08684 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CYP3A4P08684 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
CYP3A4P08684 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.11■□□□□ 0.33
CYP3A4P08684 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 AC023090.2-201ENST00000625182 2110 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CYP3A4P08684 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CYP3A4P08684 MIR1202-201ENST00000408529 83 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CYP3A4P08684 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.11■□□□□ 0.33
CYP3A4P08684 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.11■□□□□ 0.33
CYP3A4P08684 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.11■□□□□ 0.33
CYP3A4P08684 FTLP10-202ENST00000505798 471 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 AP003171.2-201ENST00000528208 925 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CYP3A4P08684 AC106820.3-201ENST00000561653 397 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.11■□□□□ 0.33
CYP3A4P08684 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CYP3A4P08684 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.11■□□□□ 0.33
CYP3A4P08684 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.11■□□□□ 0.33
CYP3A4P08684 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CYP3A4P08684 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP3A4P08684 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.1■□□□□ 0.33
CYP3A4P08684 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CYP3A4P08684 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CYP3A4P08684 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP3A4P08684 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CYP3A4P08684 FAM8A4P-201ENST00000435433 1213 ntBASIC17.1■□□□□ 0.33
CYP3A4P08684 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.1■□□□□ 0.33
CYP3A4P08684 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 AL583810.1-201ENST00000553344 1045 ntBASIC17.1■□□□□ 0.33
CYP3A4P08684 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.1■□□□□ 0.33
CYP3A4P08684 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP3A4P08684 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CYP3A4P08684 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CYP3A4P08684 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP3A4P08684 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP3A4P08684 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.09■□□□□ 0.33
CYP3A4P08684 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP3A4P08684 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CYP3A4P08684 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms