Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.48■□□□□ 0.07
RETP07949 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.48■□□□□ 0.07
RETP07949 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.48■□□□□ 0.07
RETP07949 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RETP07949 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.47■□□□□ 0.07
RETP07949 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.47■□□□□ 0.07
RETP07949 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.47■□□□□ 0.07
RETP07949 COX5BP1-201ENST00000507622 393 ntBASIC15.47■□□□□ 0.07
RETP07949 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.47■□□□□ 0.07
RETP07949 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.47■□□□□ 0.07
RETP07949 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.47■□□□□ 0.07
RETP07949 DBET-201ENST00000630918 3363 ntBASIC15.47■□□□□ 0.07
RETP07949 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RETP07949 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.47■□□□□ 0.07
RETP07949 AL138709.1-201ENST00000614840 1693 ntBASIC15.47■□□□□ 0.07
RETP07949 AC018735.1-201ENST00000437208 1502 ntBASIC15.47■□□□□ 0.07
RETP07949 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RETP07949 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.47■□□□□ 0.07
RETP07949 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.47■□□□□ 0.07
RETP07949 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.46■□□□□ 0.07
RETP07949 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RETP07949 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RETP07949 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.46■□□□□ 0.07
RETP07949 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.46■□□□□ 0.07
RETP07949 BNIP3P1-202ENST00000550043 1585 ntBASIC15.46■□□□□ 0.07
RETP07949 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.46■□□□□ 0.07
RETP07949 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RETP07949 AC091046.1-201ENST00000331871 207 ntBASIC15.46■□□□□ 0.07
RETP07949 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.46■□□□□ 0.07
RETP07949 CYP46A4P-201ENST00000414953 267 ntBASIC15.46■□□□□ 0.07
RETP07949 RPL17P11-201ENST00000417593 544 ntBASIC15.46■□□□□ 0.07
RETP07949 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.46■□□□□ 0.07
RETP07949 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.46■□□□□ 0.07
RETP07949 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.46■□□□□ 0.07
RETP07949 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.46■□□□□ 0.07
RETP07949 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.46■□□□□ 0.07
RETP07949 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.46■□□□□ 0.07
RETP07949 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.46■□□□□ 0.07
RETP07949 AC138649.2-201ENST00000615886 705 ntBASIC15.46■□□□□ 0.07
RETP07949 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.46■□□□□ 0.07
RETP07949 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RETP07949 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.46■□□□□ 0.07
RETP07949 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.46■□□□□ 0.07
RETP07949 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
RETP07949 AC099063.4-201ENST00000641099 1602 ntBASIC15.46■□□□□ 0.06
RETP07949 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RETP07949 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RETP07949 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.46■□□□□ 0.06
RETP07949 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RETP07949 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 AC092978.1-202ENST00000637590 1327 ntBASIC15.45■□□□□ 0.06
RETP07949 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 AC092850.2-201ENST00000623821 2697 ntBASIC15.45■□□□□ 0.06
RETP07949 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 AL121723.1-201ENST00000445194 1519 ntBASIC15.45■□□□□ 0.06
RETP07949 AL592424.1-201ENST00000563624 1536 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms