Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA2P01906 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.85□□□□□ -0.19
HLA-DQA2P01906 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 LINC00528-201ENST00000600723 2160 ntBASIC13.85□□□□□ -0.19
HLA-DQA2P01906 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 AC254562.1-201ENST00000417586 456 ntBASIC13.85□□□□□ -0.19
HLA-DQA2P01906 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 AL596442.2-201ENST00000610240 980 ntBASIC13.85□□□□□ -0.19
HLA-DQA2P01906 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA2P01906 CICP23-201ENST00000605013 2741 ntBASIC13.84□□□□□ -0.19
HLA-DQA2P01906 LINC01101-201ENST00000622953 1884 ntBASIC13.84□□□□□ -0.19
HLA-DQA2P01906 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 SLED1-202ENST00000512051 380 ntBASIC13.84□□□□□ -0.19
HLA-DQA2P01906 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms