Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 LINC00554-201ENST00000564841 3011 ntBASIC17.15■□□□□ 0.34
GGPS1O95749 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
GGPS1O95749 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GGPS1O95749 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.14■□□□□ 0.34
GGPS1O95749 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
GGPS1O95749 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GGPS1O95749 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GGPS1O95749 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GGPS1O95749 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GGPS1O95749 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GGPS1O95749 AC104457.1-201ENST00000401024 814 ntBASIC17.14■□□□□ 0.33
GGPS1O95749 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 AC245100.3-201ENST00000441281 285 ntBASIC17.14■□□□□ 0.33
GGPS1O95749 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.14■□□□□ 0.33
GGPS1O95749 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.14■□□□□ 0.33
GGPS1O95749 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.14■□□□□ 0.33
GGPS1O95749 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.14■□□□□ 0.33
GGPS1O95749 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.14■□□□□ 0.33
GGPS1O95749 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GGPS1O95749 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GGPS1O95749 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 AC090616.6-203ENST00000579186 1945 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.13■□□□□ 0.33
GGPS1O95749 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 CICP11-201ENST00000434745 2827 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.13■□□□□ 0.33
GGPS1O95749 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GGPS1O95749 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 BTBD6P1-201ENST00000412176 1267 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 HLA-K-203ENST00000430151 1046 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 CNN2P10-201ENST00000443067 918 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GGPS1O95749 AP006547.1-201ENST00000563435 692 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 EEF1DP1-201ENST00000585891 896 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.13■□□□□ 0.33
GGPS1O95749 AL118558.3-201ENST00000607414 1079 ntBASIC17.13■□□□□ 0.33
GGPS1O95749 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.13■□□□□ 0.33
GGPS1O95749 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GGPS1O95749 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GGPS1O95749 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GGPS1O95749 REXO1L5P-201ENST00000622260 2098 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms