Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CR382287.1-201ENST00000623954 586 ntBASIC16.03■□□□□ 0.16
BEST1O76090 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
BEST1O76090 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST1O76090 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
BEST1O76090 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
BEST1O76090 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST1O76090 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST1O76090 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
BEST1O76090 AC099336.1-201ENST00000417053 1171 ntBASIC16.02■□□□□ 0.16
BEST1O76090 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST1O76090 KRT223P-202ENST00000449164 1292 ntBASIC16.02■□□□□ 0.16
BEST1O76090 AC026434.2-201ENST00000506094 1078 ntBASIC16.02■□□□□ 0.16
BEST1O76090 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST1O76090 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST1O76090 AP005482.1-201ENST00000563722 1273 ntBASIC16.02■□□□□ 0.16
BEST1O76090 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST1O76090 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST1O76090 ECM1P1-201ENST00000604092 1279 ntBASIC16.02■□□□□ 0.16
BEST1O76090 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST1O76090 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST1O76090 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST1O76090 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST1O76090 AC023157.3-201ENST00000619086 2088 ntBASIC16.02■□□□□ 0.15
BEST1O76090 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST1O76090 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST1O76090 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
BEST1O76090 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST1O76090 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST1O76090 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.01■□□□□ 0.15
BEST1O76090 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.01■□□□□ 0.15
BEST1O76090 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.01■□□□□ 0.15
BEST1O76090 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.01■□□□□ 0.15
BEST1O76090 BNIP3P42-201ENST00000454982 569 ntBASIC16.01■□□□□ 0.15
BEST1O76090 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.01■□□□□ 0.15
BEST1O76090 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 BNIP3P29-201ENST00000598302 571 ntBASIC16.01■□□□□ 0.15
BEST1O76090 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 AC133552.6-201ENST00000613406 534 ntBASIC16.01■□□□□ 0.15
BEST1O76090 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 AC011447.5-201ENST00000616168 564 ntBASIC16.01■□□□□ 0.15
BEST1O76090 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms