Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDH16O75309 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 ADH5P3-201ENST00000433842 1137 ntBASIC15.55■□□□□ 0.08
CDH16O75309 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
CDH16O75309 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 AC015910.1-201ENST00000579400 975 ntBASIC15.55■□□□□ 0.08
CDH16O75309 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH16O75309 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 AC091812.2-201ENST00000619081 385 ntBASIC15.55■□□□□ 0.08
CDH16O75309 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH16O75309 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH16O75309 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH16O75309 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.54■□□□□ 0.08
CDH16O75309 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 HIST3H2BA-201ENST00000436555 524 ntBASIC15.54■□□□□ 0.08
CDH16O75309 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH16O75309 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 IGHV3-62-201ENST00000520057 340 ntBASIC15.54■□□□□ 0.08
CDH16O75309 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH16O75309 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH16O75309 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH16O75309 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH16O75309 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDH16O75309 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH16O75309 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH16O75309 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH16O75309 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms