Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.67□□□□□ -0.22
PFDN1O60925 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.67□□□□□ -0.22
PFDN1O60925 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.67□□□□□ -0.22
PFDN1O60925 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.67□□□□□ -0.22
PFDN1O60925 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 STK25P1-201ENST00000585406 838 ntBASIC13.67□□□□□ -0.22
PFDN1O60925 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 AC073335.2-201ENST00000610177 3441 ntBASIC13.67□□□□□ -0.22
PFDN1O60925 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PFDN1O60925 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.66□□□□□ -0.22
PFDN1O60925 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.66□□□□□ -0.22
PFDN1O60925 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.66□□□□□ -0.22
PFDN1O60925 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.66□□□□□ -0.22
PFDN1O60925 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.66□□□□□ -0.22
PFDN1O60925 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 AC073912.3-201ENST00000624414 853 ntBASIC13.66□□□□□ -0.22
PFDN1O60925 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 OR2I1P-208ENST00000641137 4948 ntBASIC13.66□□□□□ -0.22
PFDN1O60925 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PFDN1O60925 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PFDN1O60925 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PFDN1O60925 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.65□□□□□ -0.22
PFDN1O60925 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
PFDN1O60925 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
PFDN1O60925 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.65□□□□□ -0.22
PFDN1O60925 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.65□□□□□ -0.22
PFDN1O60925 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 TSPY12P-201ENST00000421279 868 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 PVRIG2P-201ENST00000435460 978 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 CDCA4P2-201ENST00000441182 718 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 UBE2SP1-201ENST00000450587 669 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms