Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSSCA1O60232 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SSSCA1O60232 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSSCA1O60232 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.58□□□□□ -0.4
SSSCA1O60232 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SSSCA1O60232 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.58□□□□□ -0.4
SSSCA1O60232 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSSCA1O60232 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SSSCA1O60232 KRT18P67-201ENST00000432816 1264 ntBASIC12.57□□□□□ -0.4
SSSCA1O60232 EEF1DP4-201ENST00000446006 880 ntBASIC12.57□□□□□ -0.4
SSSCA1O60232 AL139010.1-201ENST00000454878 894 ntBASIC12.57□□□□□ -0.4
SSSCA1O60232 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.57□□□□□ -0.4
SSSCA1O60232 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.57□□□□□ -0.4
SSSCA1O60232 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.57□□□□□ -0.4
SSSCA1O60232 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SSSCA1O60232 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.57□□□□□ -0.4
SSSCA1O60232 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSSCA1O60232 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 FOXO1B-201ENST00000504678 1527 ntBASIC12.57□□□□□ -0.4
SSSCA1O60232 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SSSCA1O60232 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.56□□□□□ -0.4
SSSCA1O60232 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 AC025580.3-201ENST00000617932 1424 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 AC152010.1-201ENST00000415779 2006 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 GHSR-202ENST00000427970 912 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.56□□□□□ -0.4
SSSCA1O60232 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.56□□□□□ -0.4
SSSCA1O60232 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.56□□□□□ -0.4
SSSCA1O60232 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 FAM215A-202ENST00000632077 792 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 AC005252.3-201ENST00000623855 2258 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms