Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PHGDHO43175 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 AC005089.1-201ENST00000619486 2241 ntBASIC15.32■□□□□ 0.04
PHGDHO43175 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.31■□□□□ 0.04
PHGDHO43175 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 CNN2P2-201ENST00000443536 909 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 CNN2P3-201ENST00000450201 906 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 KRT18P43-201ENST00000469825 1281 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.31■□□□□ 0.04
PHGDHO43175 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 AL136317.3-201ENST00000618497 906 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
PHGDHO43175 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PHGDHO43175 TUBB3P1-201ENST00000405796 1332 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
PHGDHO43175 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHGDHO43175 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.31■□□□□ 0.04
PHGDHO43175 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PHGDHO43175 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHGDHO43175 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.31■□□□□ 0.04
PHGDHO43175 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 AC117489.1-201ENST00000625169 3217 ntBASIC15.3■□□□□ 0.04
PHGDHO43175 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 AC097376.2-205ENST00000610159 5334 ntBASIC15.3■□□□□ 0.04
PHGDHO43175 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
PHGDHO43175 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.3■□□□□ 0.04
PHGDHO43175 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 TOMM22P5-201ENST00000416399 439 ntBASIC15.3■□□□□ 0.04
PHGDHO43175 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.3■□□□□ 0.04
PHGDHO43175 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.3■□□□□ 0.04
PHGDHO43175 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.3■□□□□ 0.04
PHGDHO43175 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 MTHFR-210ENST00000641407 2387 ntBASIC15.3■□□□□ 0.04
PHGDHO43175 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.3■□□□□ 0.04
PHGDHO43175 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHGDHO43175 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PHGDHO43175 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms