Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SOX1O00570 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX1O00570 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 AC063952.3-201ENST00000467756 308 ntBASIC16.02■□□□□ 0.16
SOX1O00570 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX1O00570 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 TREHP1-201ENST00000531328 465 ntBASIC16.02■□□□□ 0.16
SOX1O00570 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX1O00570 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX1O00570 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SOX1O00570 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SOX1O00570 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.02■□□□□ 0.15
SOX1O00570 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX1O00570 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 AC020931.1-201ENST00000589622 1346 ntBASIC16.01■□□□□ 0.15
SOX1O00570 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SOX1O00570 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 AC021305.1-201ENST00000520656 1514 ntBASIC16.01■□□□□ 0.15
SOX1O00570 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SOX1O00570 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX1O00570 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX1O00570 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 AP005264.6-204ENST00000588436 719 ntBASIC16.01■□□□□ 0.15
SOX1O00570 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX1O00570 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.01■□□□□ 0.15
SOX1O00570 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX1O00570 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SOX1O00570 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX1O00570 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX1O00570 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX1O00570 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16■□□□□ 0.15
SOX1O00570 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16■□□□□ 0.15
SOX1O00570 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SOX1O00570 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX1O00570 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SOX1O00570 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 PTGER4P2-201ENST00000328411 252 ntBASIC16■□□□□ 0.15
SOX1O00570 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16■□□□□ 0.15
SOX1O00570 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16■□□□□ 0.15
SOX1O00570 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 PTGER4P3-201ENST00000458150 252 ntBASIC16■□□□□ 0.15
SOX1O00570 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX1O00570 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16■□□□□ 0.15
SOX1O00570 CHCHD2P2-201ENST00000503744 321 ntBASIC16■□□□□ 0.15
SOX1O00570 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
SOX1O00570 BCL2L12P1-201ENST00000508390 733 ntBASIC16■□□□□ 0.15
SOX1O00570 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms