Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN5O00501 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.13■□□□□ 0.17
CLDN5O00501 FAM197Y7-201ENST00000432892 766 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 C2orf27AP3-201ENST00000434123 579 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 RPL7P3-201ENST00000441388 714 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN5O00501 AL590640.2-201ENST00000457038 527 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN5O00501 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN5O00501 KRT90P-201ENST00000549264 1064 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN5O00501 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN5O00501 AL354718.3-201ENST00000616414 581 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 CR382287.1-201ENST00000623954 586 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 COX11-210ENST00000639671 696 ntBASIC16.13■□□□□ 0.17
CLDN5O00501 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN5O00501 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN5O00501 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 AC012508.2-201ENST00000567613 1472 ntBASIC16.12■□□□□ 0.17
CLDN5O00501 AC022532.1-201ENST00000624563 1728 ntBASIC16.12■□□□□ 0.17
CLDN5O00501 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN5O00501 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN5O00501 KRT223P-202ENST00000449164 1292 ntBASIC16.12■□□□□ 0.17
CLDN5O00501 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN5O00501 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN5O00501 AC133552.6-201ENST00000613406 534 ntBASIC16.12■□□□□ 0.17
CLDN5O00501 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 AC144831.1-201ENST00000573312 2656 ntBASIC16.12■□□□□ 0.17
CLDN5O00501 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN5O00501 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLDN5O00501 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN5O00501 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN5O00501 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN5O00501 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN5O00501 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN5O00501 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN5O00501 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN5O00501 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN5O00501 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms