Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 ACTBP11-201ENST00000436287 1126 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 RPL7P3-201ENST00000441388 714 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 BNIP3P42-201ENST00000454982 569 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 RN7SL219P-201ENST00000582872 296 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 BNIP3P29-201ENST00000598302 571 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC011447.5-201ENST00000616168 564 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC006449.6-201ENST00000612330 2296 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL109954.1-202ENST00000564051 2148 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC117489.1-201ENST00000625169 3217 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 FAM86MP-201ENST00000340703 885 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 BRWD1P1-201ENST00000401091 371 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP001063.1-201ENST00000568332 529 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL049840.4-201ENST00000602422 811 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL450472.2-201ENST00000603663 1156 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 RPSAP52-203ENST00000622976 1023 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC00552-201ENST00000625151 2579 ntBASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TMX2-CTNND1H3BSU7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms