Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 OR51A9P-201ENST00000422578 911 ntBASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AC083801.1-201ENST00000491689 358 ntBASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AP005264.6-204ENST00000588436 719 ntBASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AC027601.3-201ENST00000622907 509 ntBASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 AC005332.8-201ENST00000622750 2735 ntBASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 AL672207.1-201ENST00000328462 1570 ntBASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 NHP2P1-201ENST00000335274 462 ntBASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 XBP1P1-201ENST00000436573 652 ntBASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 AC002044.2-201ENST00000624910 970 ntBASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 CTBP2P8-201ENST00000422584 1330 ntBASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM88BA6NKF7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AC010632.2-201ENST00000588369 1224 ntBASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AC140113.1-201ENST00000603467 169 ntBASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 MIR6746-201ENST00000620971 63 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms