Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AL137783.1-201ENST00000623494 1896 ntBASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ACKR1-201ENST00000368121 1240 ntBASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AC022616.1-201ENST00000518688 554 ntBASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AL132655.2-201ENST00000596276 594 ntBASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 MIR8072-201ENST00000614241 80 ntBASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPB13A6NJU9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 NORAD-201ENST00000565493 5339 ntBASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPB13A6NJU9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AL096865.1-201ENST00000606796 927 ntBASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AP005019.2-201ENST00000615104 511 ntBASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB13A6NJU9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB13A6NJU9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB13A6NJU9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms