Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 AC073439.1-201ENST00000624121 1774 ntBASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP4B1Q9Y6B7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 FAM8A3P-201ENST00000427218 844 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC245100.5-201ENST00000452108 331 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC093520.2-201ENST00000561830 333 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AL138918.1-201ENST00000568306 659 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC027612.4-201ENST00000605371 583 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC126335.2-201ENST00000623362 4637 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 AC127383.1-201ENST00000444697 1800 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 CICP8-201ENST00000455800 2813 ntBASIC14.84□□□□□ -0.03
AP4B1Q9Y6B7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 AC097359.2-201ENST00000604992 2389 ntBASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP4B1Q9Y6B7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms