Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 NORAD-201ENST00000565493 5339 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC020658.6-201ENST00000623564 1870 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 TPM3P8-201ENST00000330554 643 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AL590640.2-201ENST00000457038 527 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 RNA5SP486-201ENST00000515961 83 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 RNA5SP412-201ENST00000516234 123 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC023310.1-201ENST00000554836 735 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC010328.2-201ENST00000597698 1111 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 AC008687.7-202ENST00000637404 953 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PAUPAR-201ENST00000630360 2965 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00588Q9Y4M8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00588Q9Y4M8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms