Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AL671883.3-201ENST00000603274 991 ntBASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AL589739.1-201ENST00000607720 493 ntBASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 MIR6080-201ENST00000617359 66 ntBASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 AL080243.2-201ENST00000418783 582 ntBASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 MIR4453-201ENST00000584019 89 ntBASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 AL033527.5-202ENST00000641632 1098 ntBASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J3Q9H1A7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
POLR2J3Q9H1A7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms