Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 SPDYE17-201ENST00000412399 783 ntBASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXP3Q9BZS1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC022144.1-201ENST00000602255 1580 ntBASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 GAPDHP21-201ENST00000450301 1010 ntBASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC012508.2-201ENST00000567613 1472 ntBASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXP3Q9BZS1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXP3Q9BZS1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXP3Q9BZS1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
FOXP3Q9BZS1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXP3Q9BZS1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXP3Q9BZS1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms