Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 AC099398.1-201ENST00000567919 2776 ntBASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 AC073150.1-201ENST00000450406 1084 ntBASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 Z98259.2-201ENST00000641583 609 ntBASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH11XQ9BZA7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 IQSEC3P1-201ENST00000538799 536 ntBASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 RN7SL555P-201ENST00000584742 339 ntBASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH11XQ9BZA7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 AL359258.3-201ENST00000622910 2331 ntBASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH11XQ9BZA7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 IGLV3-15-201ENST00000518356 244 ntBASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 AP003419.4-201ENST00000616071 517 ntBASIC19.57■□□□□ 0.72
PCDH11XQ9BZA7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms