Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC46A2Q9BY10 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 AC020658.6-201ENST00000623564 1870 ntBASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 AL354877.1-201ENST00000424412 413 ntBASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SERPINA13P-202ENST00000478994 924 ntBASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A2Q9BY10 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A2Q9BY10 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 AC016700.1-201ENST00000429424 312 ntBASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A2Q9BY10 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms