Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AC092127.1-201ENST00000567093 3455 ntBASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 KRT17P8-201ENST00000540749 863 ntBASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC073347.1-201ENST00000421633 2643 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 CICP13-201ENST00000422015 2789 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ATP5G2P4-201ENST00000442175 420 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 IGHV3-71-201ENST00000523324 359 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AP001063.1-201ENST00000568332 529 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC233724.13-201ENST00000598383 410 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC025181.2-201ENST00000606994 802 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC017083.2-201ENST00000608069 979 ntBASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms