Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 AC010336.2-201ENST00000564226 506 ntBASIC14.35□□□□□ -0.11
TM9SF2Q99805 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF2Q99805 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF2Q99805 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 HAUS4P1-201ENST00000406739 1145 ntBASIC14.34□□□□□ -0.11
TM9SF2Q99805 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AL512361.1-201ENST00000554200 418 ntBASIC14.34□□□□□ -0.11
TM9SF2Q99805 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 AL359183.1-201ENST00000623796 2132 ntBASIC14.34□□□□□ -0.11
TM9SF2Q99805 AC012183.1-201ENST00000625197 499 ntBASIC14.34□□□□□ -0.11
TM9SF2Q99805 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 LINC00552-201ENST00000625151 2579 ntBASIC14.34□□□□□ -0.11
TM9SF2Q99805 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF2Q99805 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF2Q99805 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF2Q99805 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.33□□□□□ -0.11
TM9SF2Q99805 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF2Q99805 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.33□□□□□ -0.11
TM9SF2Q99805 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TM9SF2Q99805 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF2Q99805 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.33□□□□□ -0.11
TM9SF2Q99805 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms