Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NPAS2Q99743 AC015656.1-201ENST00000624209 3578 ntBASIC15.11■□□□□ 0.01
NPAS2Q99743 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NPAS2Q99743 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS2Q99743 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPAS2Q99743 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS2Q99743 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS2Q99743 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 AL136982.4-201ENST00000437689 1740 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS2Q99743 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 RNA5SP410-201ENST00000516285 106 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS2Q99743 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AL450472.2-201ENST00000603663 1156 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 AL138828.2-201ENST00000615812 383 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 AC073592.8-201ENST00000624126 511 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS2Q99743 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPAS2Q99743 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NPAS2Q99743 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPAS2Q99743 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NPAS2Q99743 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS2Q99743 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 AC041040.2-201ENST00000622926 2899 ntBASIC15.1■□□□□ 0.01
NPAS2Q99743 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 AC097376.2-205ENST00000610159 5334 ntBASIC15.09■□□□□ 0.01
NPAS2Q99743 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 AC004987.2-201ENST00000395959 1148 ntBASIC15.09■□□□□ 0.01
NPAS2Q99743 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 TSSK5P-201ENST00000423978 907 ntBASIC15.09■□□□□ 0.01
NPAS2Q99743 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS2Q99743 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
NPAS2Q99743 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS2Q99743 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS2Q99743 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms