Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.21■□□□□ 0.19
RAD9AQ99638 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 AC010141.1-201ENST00000411585 623 ntBASIC16.21■□□□□ 0.19
RAD9AQ99638 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.21■□□□□ 0.19
RAD9AQ99638 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.21■□□□□ 0.19
RAD9AQ99638 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 RCC2P8-201ENST00000502779 1035 ntBASIC16.21■□□□□ 0.19
RAD9AQ99638 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.21■□□□□ 0.19
RAD9AQ99638 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.21■□□□□ 0.19
RAD9AQ99638 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 NPM1P43-201ENST00000558669 786 ntBASIC16.21■□□□□ 0.19
RAD9AQ99638 MIR4754-201ENST00000582477 89 ntBASIC16.21■□□□□ 0.19
RAD9AQ99638 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.21■□□□□ 0.19
RAD9AQ99638 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.21■□□□□ 0.19
RAD9AQ99638 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RAD9AQ99638 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.21■□□□□ 0.19
RAD9AQ99638 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
RAD9AQ99638 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 REXO1L5P-201ENST00000622260 2098 ntBASIC16.21■□□□□ 0.19
RAD9AQ99638 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAD9AQ99638 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.21■□□□□ 0.19
RAD9AQ99638 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RAD9AQ99638 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.21■□□□□ 0.18
RAD9AQ99638 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAD9AQ99638 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 RPL5P21-201ENST00000404620 815 ntBASIC16.2■□□□□ 0.18
RAD9AQ99638 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 POU5F1P2-201ENST00000521750 823 ntBASIC16.2■□□□□ 0.18
RAD9AQ99638 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC009779.1-201ENST00000551138 283 ntBASIC16.2■□□□□ 0.18
RAD9AQ99638 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.2■□□□□ 0.18
RAD9AQ99638 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAD9AQ99638 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAD9AQ99638 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RAD9AQ99638 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAD9AQ99638 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 E2F3P2-201ENST00000447755 1422 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 TBC1D3J-201ENST00000620719 1426 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AC127383.1-201ENST00000444697 1800 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms