Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.73■□□□□ 0.11
CDCA3Q99618 KLF2P1-201ENST00000447438 1042 ntBASIC15.73■□□□□ 0.11
CDCA3Q99618 AC130709.1-201ENST00000484779 1212 ntBASIC15.73■□□□□ 0.11
CDCA3Q99618 AC008723.1-201ENST00000506922 207 ntBASIC15.73■□□□□ 0.11
CDCA3Q99618 ALG3P1-201ENST00000508806 1114 ntBASIC15.73■□□□□ 0.11
CDCA3Q99618 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.73■□□□□ 0.11
CDCA3Q99618 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDCA3Q99618 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.73■□□□□ 0.11
CDCA3Q99618 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDCA3Q99618 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDCA3Q99618 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.73■□□□□ 0.11
CDCA3Q99618 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDCA3Q99618 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 AC005332.8-201ENST00000622750 2735 ntBASIC15.72■□□□□ 0.11
CDCA3Q99618 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
CDCA3Q99618 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 RN7SL67P-201ENST00000492147 296 ntBASIC15.72■□□□□ 0.11
CDCA3Q99618 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.72■□□□□ 0.11
CDCA3Q99618 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.72■□□□□ 0.11
CDCA3Q99618 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 MIR6720-201ENST00000611664 98 ntBASIC15.72■□□□□ 0.11
CDCA3Q99618 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.72■□□□□ 0.11
CDCA3Q99618 AL157414.3-201ENST00000624276 1954 ntBASIC15.72■□□□□ 0.11
CDCA3Q99618 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.72■□□□□ 0.11
CDCA3Q99618 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.72■□□□□ 0.11
CDCA3Q99618 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.72■□□□□ 0.11
CDCA3Q99618 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDCA3Q99618 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDCA3Q99618 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.71■□□□□ 0.11
CDCA3Q99618 RPS9P1-201ENST00000419943 583 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 TLE1P1-201ENST00000422965 589 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 AP002803.1-201ENST00000528836 498 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 AC026803.1-201ENST00000569130 274 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 AC005962.1-201ENST00000584100 773 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDCA3Q99618 AP001065.2-201ENST00000617205 644 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.71■□□□□ 0.11
CDCA3Q99618 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDCA3Q99618 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDCA3Q99618 AL137783.1-201ENST00000623494 1896 ntBASIC15.71■□□□□ 0.11
CDCA3Q99618 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.71■□□□□ 0.1
CDCA3Q99618 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms