Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC027601.5-201ENST00000624065 2482 ntBASIC14.08□□□□□ -0.15
SNX18Q96RF0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNX18Q96RF0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNX18Q96RF0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SNX18Q96RF0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 KRT18P32-201ENST00000424695 1287 ntBASIC14.08□□□□□ -0.16
SNX18Q96RF0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC093520.2-201ENST00000561830 333 ntBASIC14.08□□□□□ -0.16
SNX18Q96RF0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC105021.1-202ENST00000570572 669 ntBASIC14.08□□□□□ -0.16
SNX18Q96RF0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 PTENP1-202ENST00000532280 3996 ntBASIC14.08□□□□□ -0.16
SNX18Q96RF0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.08□□□□□ -0.16
SNX18Q96RF0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 AL035456.1-201ENST00000456064 1369 ntBASIC14.08□□□□□ -0.16
SNX18Q96RF0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNX18Q96RF0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.07□□□□□ -0.16
SNX18Q96RF0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 BANF1P1-201ENST00000553684 263 ntBASIC14.07□□□□□ -0.16
SNX18Q96RF0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AC092364.2-202ENST00000597012 1073 ntBASIC14.07□□□□□ -0.16
SNX18Q96RF0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AC009093.7-201ENST00000623853 1223 ntBASIC14.07□□□□□ -0.16
SNX18Q96RF0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 PCDHA3-202ENST00000532566 4594 ntBASIC14.07□□□□□ -0.16
SNX18Q96RF0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms