Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AC055811.4-201ENST00000624039 1754 ntBASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 HLA-K-203ENST00000430151 1046 ntBASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 AP003171.2-201ENST00000528208 925 ntBASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 OR10B1P-201ENST00000601666 907 ntBASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC85AQ96PX6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 FAM8A4P-201ENST00000435433 1213 ntBASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AC006033.1-201ENST00000440505 426 ntBASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AC104982.3-201ENST00000581995 514 ntBASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 EEF1DP1-201ENST00000585891 896 ntBASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 AL023775.1-201ENST00000454907 1746 ntBASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC85AQ96PX6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AC018735.1-201ENST00000437208 1502 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms