Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AL162726.2-201ENST00000438986 1017 ntBASIC14.89□□□□□ -0.03
RNF31Q96EP0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AC022494.1-201ENST00000466044 728 ntBASIC14.89□□□□□ -0.03
RNF31Q96EP0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AC120045.2-201ENST00000567334 178 ntBASIC14.89□□□□□ -0.03
RNF31Q96EP0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC073347.1-201ENST00000421633 2643 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC092127.1-201ENST00000567093 3455 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 AP001582.1-201ENST00000525856 295 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 CLUHP6-201ENST00000580789 941 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC005252.2-201ENST00000624630 1141 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF31Q96EP0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 CICP13-201ENST00000422015 2789 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF31Q96EP0 FAM45BP-202ENST00000592932 1624 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 AC013268.4-201ENST00000637413 2228 ntBASIC14.88□□□□□ -0.03
RNF31Q96EP0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC099336.1-201ENST00000417053 1171 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 SOCS2P1-201ENST00000417727 557 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC136604.1-201ENST00000418535 575 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 AL442647.2-201ENST00000429864 857 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 FTH1P14-201ENST00000482930 551 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC068587.3-201ENST00000526613 355 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC106886.1-201ENST00000568660 600 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 MIR4313-201ENST00000580760 101 ntBASIC14.87□□□□□ -0.03
RNF31Q96EP0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC015936.2-201ENST00000593177 259 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms