Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 MEP1AP4-201ENST00000423244 1087 ntBASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AL391069.4-201ENST00000609583 481 ntBASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4CQ96CF2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC084364.1-201ENST00000551967 1556 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 WASH3P-207ENST00000560956 1394 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AL133267.1-201ENST00000398220 340 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC092552.1-201ENST00000547243 906 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC036164.1-201ENST00000570544 333 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AL033527.5-201ENST00000641382 801 ntBASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4CQ96CF2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4CQ96CF2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 AC098614.1-201ENST00000368528 745 ntBASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 U91328.1-201ENST00000437528 223 ntBASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP4CQ96CF2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms