Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL22A1Q8NFW1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL22A1Q8NFW1 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.77■□□□□ 0.75
COL22A1Q8NFW1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COL22A1Q8NFW1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.77■□□□□ 0.75
COL22A1Q8NFW1 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 SIGLEC22P-201ENST00000599104 714 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 MIR6746-201ENST00000620971 63 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 ENPP7P8-202ENST00000527856 1345 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 AC023090.2-201ENST00000625182 2110 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 PYY2-201ENST00000315776 282 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 PTGER4P2-201ENST00000328411 252 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 PTGER4P3-201ENST00000458150 252 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RN7SL277P-201ENST00000481521 288 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 AC007250.1-201ENST00000608934 338 ntBASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.76■□□□□ 0.75
COL22A1Q8NFW1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 KRT17P5-201ENST00000332088 839 ntBASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL22A1Q8NFW1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.74■□□□□ 0.75
COL22A1Q8NFW1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL22A1Q8NFW1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL22A1Q8NFW1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL22A1Q8NFW1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms