Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 AC126365.1-201ENST00000578585 1514 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 RPL7P3-201ENST00000441388 714 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 AC022616.1-201ENST00000518688 554 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 AC244669.2-201ENST00000612320 853 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 AC012508.2-201ENST00000567613 1472 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 AC105917.1-201ENST00000506637 2539 ntBASIC16.47■□□□□ 0.23
BEST2Q8NFU1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BEST2Q8NFU1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AC132872.4-202ENST00000622924 2756 ntBASIC16.46■□□□□ 0.23
BEST2Q8NFU1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AP000812.2-201ENST00000538934 718 ntBASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 KRT90P-201ENST00000549264 1064 ntBASIC16.46■□□□□ 0.23
BEST2Q8NFU1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 AL138709.1-201ENST00000614840 1693 ntBASIC16.46■□□□□ 0.23
BEST2Q8NFU1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BEST2Q8NFU1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 CICP6-201ENST00000457191 2729 ntBASIC16.46■□□□□ 0.22
BEST2Q8NFU1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST2Q8NFU1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.45■□□□□ 0.22
BEST2Q8NFU1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms