Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 RARRES2P5-201ENST00000564013 466 ntBASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AL158212.4-201ENST00000624062 1286 ntBASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 AC020658.6-201ENST00000623564 1870 ntBASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf42Q8N5U0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TPRX2P-201ENST00000535362 881 ntBASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 MIR3197-201ENST00000582241 73 ntBASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AC138761.1-201ENST00000584393 385 ntBASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf42Q8N5U0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms