Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC83Q8IWF9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AC018529.2-202ENST00000611482 3087 ntBASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 FAM86GP-201ENST00000448322 971 ntBASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC83Q8IWF9 AC126755.1-201ENST00000525846 6405 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 MIR943-201ENST00000401286 94 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 TSSK5P-201ENST00000423978 907 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 AL589987.1-201ENST00000453380 819 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 AC067863.1-201ENST00000494933 530 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 SPDYE18-201ENST00000510091 1050 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 DUX4L27-201ENST00000554796 1261 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 AL645728.2-202ENST00000641679 227 ntBASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC83Q8IWF9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AC005089.1-201ENST00000619486 2241 ntBASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms