Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 RCN1P1-201ENST00000400413 996 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC022616.7-201ENST00000525383 220 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC074051.2-201ENST00000565115 352 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC097493.4-201ENST00000641197 219 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AC127383.1-201ENST00000444697 1800 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CROCCP3Q8IVE0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AC106818.1-201ENST00000623223 3242 ntBASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 TSSC2-201ENST00000450217 709 ntBASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AC104819.1-201ENST00000504587 486 ntBASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 NKAPP1-205ENST00000585790 367 ntBASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms