Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 RPL13AP23-201ENST00000480739 586 ntBASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 KRT8P23-201ENST00000560090 1207 ntBASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC026120.1-201ENST00000611536 926 ntBASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC018442.1-201ENST00000421439 2061 ntBASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 AC136759.1-202ENST00000530858 2194 ntBASIC15.31■□□□□ 0.04
NUDCD3Q8IVD9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms