Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AL354989.2-201ENST00000435838 1540 ntBASIC17.07■□□□□ 0.32
TRIM50Q86XT4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RN7SL48P-201ENST00000579283 293 ntBASIC17.07■□□□□ 0.32
TRIM50Q86XT4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AC244093.1-201ENST00000610837 814 ntBASIC17.07■□□□□ 0.32
TRIM50Q86XT4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AL359258.3-201ENST00000622910 2331 ntBASIC17.07■□□□□ 0.32
TRIM50Q86XT4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC020907.1-201ENST00000616460 1350 ntBASIC17.06■□□□□ 0.32
TRIM50Q86XT4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 TPM3P8-201ENST00000330554 643 ntBASIC17.06■□□□□ 0.32
TRIM50Q86XT4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 Z93015.1-201ENST00000451718 390 ntBASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 AC090616.6-203ENST00000579186 1945 ntBASIC17.06■□□□□ 0.32
TRIM50Q86XT4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM50Q86XT4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 REXO1L5P-201ENST00000622260 2098 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AC007969.1-201ENST00000433675 447 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 PFN1P12-201ENST00000455938 534 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms