Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 HMGB1P8-201ENST00000558211 949 ntBASIC15.59■□□□□ 0.09
PACS2Q86VP3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.59■□□□□ 0.09
PACS2Q86VP3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 AC129492.6-201ENST00000611383 1305 ntBASIC15.59■□□□□ 0.09
PACS2Q86VP3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PACS2Q86VP3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.59■□□□□ 0.09
PACS2Q86VP3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 AC020658.7-201ENST00000624274 2442 ntBASIC15.58■□□□□ 0.09
PACS2Q86VP3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PACS2Q86VP3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PACS2Q86VP3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.58■□□□□ 0.09
PACS2Q86VP3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PACS2Q86VP3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.58■□□□□ 0.08
PACS2Q86VP3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC007919.2-201ENST00000444110 511 ntBASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC087163.2-201ENST00000457299 853 ntBASIC15.58■□□□□ 0.08
PACS2Q86VP3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC040169.1-201ENST00000565382 521 ntBASIC15.58■□□□□ 0.08
PACS2Q86VP3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.58■□□□□ 0.08
PACS2Q86VP3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PACS2Q86VP3 AC113367.3-201ENST00000508316 1912 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms